Package <Unnamed>

Class Summary

Diameter	Calculates the diameter of the plant in top view images.
HTP	ImageJ-Plugin: HTPheno (High-Throughput Phenotyping) The main programme which contains the workflow, implemented as Plugin for ImageJ.
HTPcalculator	HTPcalculator Contains functions related to retrieving image parameters from the image after the current classification took place.
HTPcalib	ImageJ Plugin: HTPcalib (high-throughput phenotyping calibration) Allows to obtain colour ranges for each class from images, implemented as Plugin for ImageJ.
HTPconfig	HTPconfig Contains all methods related to reading the configuration files and returning the contained information in appropriate data structures.
HTPinputdirectory	HTPinput Reads images from file system in the 'complete directory' mode of HTPheno.
HTPinputopenfile	HTPinput Reads images from file system in the 'single file' mode of HTPheno.
HTPoutput	HTPoutput This class stores the measurement results and writes them to the results file (HTPheno_analysis_results_date--time.csv).
HTPprocessor	HTPprocessor Contains all methods which are used for the image classification process.
modifiedImagesToStack	Adapted from the ImageJ Developer Source.
RegionFill	Classifies contiguous sets of unclassified pixel.
SearchUnclassified	Searches for unclassified regions to classify them.